STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2247Bacterioferritin-associated ferredoxin. (79 aa)    
Predicted Functional Partners:
AZC_2246
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.933
nifE
Nitrogenase MoFe cofactor biosynthesis NifE protein; Belongs to the NifD/NifK/NifE/NifN family.
  
  
 0.642
AZC_2744
Uncharacterized iron-regulated protein; IrpA.
  
  
 0.639
AZC_4114
Alpha amylase.
      
 0.544
AZC_2245
Iron compound ABC transporter periplasmic iron compound-binding protein.
  
    0.446
tolA
Putative TolA protein.
  
  
 0.438
AZC_1260
C-terminal TonB protein.
  
  
 0.438
AZC_3246
Vicibactin biosynthesis non-ribosomal peptide synthase protein.
      
 0.420
AZC_2248
Two component sensor kinase.
       0.414
AZC_2244
Iron compound ABC transporter permease protein.
  
    0.412
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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