STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2248Two component sensor kinase. (811 aa)    
Predicted Functional Partners:
pdhB
Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.895
AZC_0915
Bacteriophytochrome.
   
 
 0.706
AZC_3098
Putative ATPase.
   
 
 0.649
AZC_1854
Response regulator receiver.
 
 
 
 0.625
AZC_2249
Uncharacterized conserved protein; COG5491.
 
     0.588
AZC_4096
Unknown function protein; With GGDEF motif, DUF1.
  
 
 0.562
AZC_3923
Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor.
   
 
 0.464
AZC_4617
Hypothetical protein.
  
     0.458
AZC_3621
Conserved hypothetical protein.
 
   
 0.428
AZC_1080
Hypothetical protein.
  
 
 
 0.417
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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