STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2272Putative sugar phosphate permease. (437 aa)    
Predicted Functional Partners:
rhmD
L-alanine-DL-glutamate epimerase; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).
 
  
 0.855
AZC_2270
Putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
  
    0.775
AZC_2269
Short-chain dehydrogenase; Reductase SDR.
  
    0.757
iclR-4
Transcriptional regulator; IclR family.
  
  
 0.607
AZC_2268
Putative MFS permease.
 
    
0.584
AZC_2685
Dihydrodipicolinate synthetase; Belongs to the DapA family.
  
  
 0.450
AZC_2692
Dihydrodipicolinate synthase family protein; Belongs to the DapA family.
  
  
 0.450
AZC_2857
Dihydrodipicolinate synthase; Belongs to the DapA family.
  
  
 0.450
AZC_2858
Permeases; The major facilitator superfamily.
  
     0.408
AZC_0768
Putative MFS transporter.
  
     0.402
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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