STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2298SmpA / OmlA family. (212 aa)    
Predicted Functional Partners:
bamA
Putative outer membrane protein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.915
bamD
Putative lipoprotein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.903
praR
Putative transcriptional regulator; PhrR-like regulator conserved in the Alphaproteobacteria; helix-turn-helix motif; praR is involved in the expression of reb genes.
 
     0.748
AZC_2296
Conserved hypothetical protein; ATP-dependent DNA ligase.
 
     0.743
hemY
Putative HemY protein; N-terminal precursor.
  
     0.724
AZC_1095
Protein of unknown function; DUF1491.
  
     0.696
AZC_0569
DNA polymerase III; Delta subunit.
 
     0.689
AZC_2297
Uncharacterized conserved protein.
 
     0.668
AZC_2805
Hypothetical protein; Proline-rich region.
  
     0.667
lptD
Putative organic solvent tolerance protein-like precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.666
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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