STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2462ABC transporter permease protein. (304 aa)    
Predicted Functional Partners:
AZC_2461
Spermidine/putrescine ABC transporter permease precursor.
  
 0.979
AZC_2463
Twin-arginine translocation pathway signal precursor.
 
  
 0.962
AZC_2460
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.945
AZC_3517
Spermidine/putrescine ABC transporter permease protein.
  
0.944
AZC_2455
Polyamine ABC transporter permease protein.
  
0.930
AZC_2723
ABC transporter permease protein.
  
0.910
AZC_2457
Twin-arginine translocation pathway signal precursor.
 
  
 0.900
AZC_1989
ABC transporter permease protein.
  
 0.874
AZC_1799
ABC opine/polyamine transporter inner membrane subunit 1.
  
0.850
fbpC
ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 0.848
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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