STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnN-2Guanosine monophosphate kinase like protein; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP); In the N-terminal section; belongs to the ribose 1,5- bisphosphokinase family. (693 aa)    
Predicted Functional Partners:
surE
Survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.937
AZC_1945
Cytosine deaminase and related metal-dependent hydrolase.
    
 0.909
AZC_2468
Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
  
    0.820
era
Transcriptional regulator; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.697
AZC_3395
Putative C-P (carbon-phosphorus) lyase component protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
  
  
 0.690
phnG
Phosphonate metabolism protein.
  
  
 0.675
AZC_3394
Phosphonate metabolism protein.
  
  
 0.655
phnL
ATP-binding component phosphonate transport; HisP-like nucleotide binding protein.
  
  
 0.654
phnK
Phosphonate ABC transporter ATP-binding component.
  
  
 0.652
AZC_3399
Phosphonate metabolism protein.
  
 0.644
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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