STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caiBPutative acyl-CoA transferase; Belongs to the CoA-transferase III family. (406 aa)    
Predicted Functional Partners:
AZC_2501
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.780
AZC_2499
Putative amidase; Belongs to the amidase family.
       0.773
AZC_2502
ABC transporter substrate binding protein.
       0.671
AZC_2873
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.586
AZC_1808
enoyl-CoA hydratase; Isomerase.
 
  
 0.539
lysR-42
Transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
       0.535
AZC_0802
enoyl-CoA hydratase; Isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.530
AZC_1531
enoyl-CoA hydratase; Carnithine racemase.
 
  
 0.530
AZC_1544
Putative enoyl-CoA hydratase.
  
  
 0.530
AZC_2187
enoyl-CoA hydratase.
  
  
 0.530
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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