STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2519Conserved hypothetical protein; Similar ATP12 ATPase. (258 aa)    
Predicted Functional Partners:
AZC_2520
HAD-superfamily hydrolase; Subfamily IA, variant 1.
      0.879
AZC_2521
Hypothetical protein.
       0.718
tfoX
TfoX protein; N-terminal domain.
       0.714
AZC_1561
Putative NADH dehydrogenase (ubiquinone) Fe-S protein 4.
  
     0.661
AZC_0318
Methyltransferase.
  
     0.656
AZC_0553
Conserved hypothetical protein; MhpC, putative hydrolases or acyltransferase.
  
     0.645
cobT
Cobalt chelatase; CobT subunit.
  
     0.617
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
   
 0.588
AZC_2948
Putative lipopolysaccharide-modifying enzyme.
  
     0.588
AZC_3148
Uncharacterized conserved protein; UCP032146; Belongs to the UPF0262 family.
  
   
 0.581
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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