STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2776Putative hydroxypyruvate isomerase protein; Belongs to the hyi family. (264 aa)    
Predicted Functional Partners:
AZC_2775
Type III effector Hrp-dependent outer protein.
 
  
 0.883
AZC_2777
Oxidoreductase.
  
 0.846
AZC_2779
Putative L-fuculose-phosphate aldolase.
 
  
 0.708
lacI-4
Transcriptional regulator; LacI family.
       0.550
AZC_3488
Glyoxylate carboligase; Belongs to the TPP enzyme family.
 
  
 0.524
AZC_2686
Type III effector Hrp-dependent outer protein; Hop.
 
  
 0.444
AZC_0324
Hydroxypyruvate reductase.
 
   
 0.412
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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