STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2782Type 1 glutamine amidotransferase; GATase1-like domain. (290 aa)    
Predicted Functional Partners:
AZC_2781
Uncharacterized conserved protein.
 
     0.723
lysR-47
Transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.713
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
 
 0.628
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
   0.596
AZC_2780
Oxidoreductase; Aldo/keto reductase family.
  
  
 0.542
AZC_2049
Histone deacetylase family protein.
  
  0.534
AZC_0414
Histone deacetylase superfamily.
  
  0.504
AZC_3746
Succinate dehydrogenase/fumarate reductase iron-sulfur protein.
   
 
 0.497
AZC_2977
Organic hydroperoxide resistance protein.
 
  
 0.494
guaA
Putative GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.469
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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