STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2814Putative exopolysaccharide regulatory protein; TPR repeat, SEL1 subfamily. (351 aa)    
Predicted Functional Partners:
AZC_0512
Putative sel1-like repeat protein.
  
     0.773
AZC_1154
Sel1-like repeat protein.
  
     0.770
AZC_2218
Putative transmembrane protein.
 
 
 
 0.754
AZC_0949
Hypothetical protein.
  
     0.736
AZC_1201
Hypothetical protein.
  
     0.722
AZC_1224
Conserved hypothetical protein; Invasion associated locus B.
  
     0.721
AZC_4671
Hypothetical protein.
 
     0.707
AZC_2961
Conserved hypothetical protein; Invasion associated locus B.
  
     0.697
AZC_1097
Putative integral membrane protein.
  
     0.680
AZC_3544
Hypothetical protein.
  
     0.676
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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