STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2918Hydantoinase; Oxoprolinase. (287 aa)    
Predicted Functional Partners:
AZC_2916
Glycosyltransferase; Group 1 family protein.
       0.773
AZC_2917
Glycosyltransferase; Group 1 family protein.
       0.773
AZC_3466
TPR repeat.
 
     0.626
polA
DNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.543
AZC_0040
Putative capsule polysaccharide export inner-membrane protein.
 
   
 0.532
wcbD-2
WcbD protein.
 
    0.502
wcbD
WcbD protein.
 
    0.492
AZC_0046
Glycosyltransferase.
  
     0.426
AZC_2926
TPR repeat protein.
 
     0.410
wzt
Putative ABC-2 transporter.
 
     0.403
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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