STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2970Long-chain fatty acid transport protein. (491 aa)    
Predicted Functional Partners:
AZC_2973
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.728
AZC_2969
Long-chain fatty acid--CoA ligase.
 
  
 0.669
AZC_1328
TonB-dependent receptor.
  
   
 0.506
merR-4
Transcriptional regulator; MerR family.
 
     0.504
AZC_2975
Putative sterol carrier protein.
 
    0.471
AZC_2972
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.468
AZC_1213
Putative outer membrane protein 1; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
   
 0.456
AZC_2968
Putative permease.
       0.425
AZC_2249
Uncharacterized conserved protein; COG5491.
  
     0.404
AZC_2873
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.404
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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