STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2995ABC transporter periplasmic binding protein. (508 aa)    
Predicted Functional Partners:
AZC_2994
ABC transporter permease protein.
  0.988
AZC_2993
ABC-type dipeptide/oligopeptide/nickel transport permease protein.
  0.978
AZC_2996
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.939
AZC_2991
D-aminopeptidase.
 
     0.752
rpiR-2
Transcriptional regulator; RpiR family.
 
     0.734
AZC_2992
Putative D-aminopeptidase.
 
     0.699
AZC_0774
ABC transporter permease protein.
   0.633
AZC_0775
ABC transporter permease protein.
   0.608
AZC_2696
Peptide ABC transporter permease protein.
   0.601
AZC_3774
Oligopeptide ABC transporter permease protein.
   0.594
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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