STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3000ABC transport solute-binding protein. (406 aa)    
Predicted Functional Partners:
AZC_3002
ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.932
AZC_3001
ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.928
AZC_3003
ABC transport ATP-binding protein.
 
  
 0.922
tetR-9
Transcriptional regulator; TetR family.
 
     0.866
AZC_2793
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
AZC_2999
Amidohydrolase.
 
     0.792
AZC_3005
ABC transport ATP-binding protein.
 
    0.791
AZC_1542
Putative branched-chain amino acid ABC-type transport permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.760
AZC_2111
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.730
AZC_2110
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.729
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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