STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3045Putative short-chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (231 aa)    
Predicted Functional Partners:
AZC_3043
Oligopeptide/dipeptide ABC transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.823
AZC_3047
BFD-like (2Fe-2S)-binding protein; BFD-like [2Fe-2S]-binding domain.
 
    0.808
AZC_3046
Conserved hypothetical protein; Similar to ferredoxin.
       0.777
AZC_3042
Peptide ABC transporter permease protein.
       0.773
AZC_3044
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
AZC_2341
NAD-dependent epimerase; Dehydratase:short-chain dehydrogenase/reductase SDR.
 
    0.768
AZC_1980
Short-chain dehydrogenase/reductase SDR.
 
    0.766
AZC_0536
NAD/NADP dependent oxidoreductase.
 
    0.740
AZC_3534
Short-chain dehydrogenase.
 
    0.733
AZC_0038
Putative short-chain dehydrogenase; Reductase SDR.
 
     0.710
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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