STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3076ABC-type nitrate/sulfonate/bicarbonate transport ATPase component. (441 aa)    
Predicted Functional Partners:
AZC_3077
Putative ABC transporter nitrate permease.
 
   
 0.971
AZC_4374
ABC transporter permease protein.
    0.520
AZC_2278
ABC-type nitrate/sulfonate/bicarbonate transport permease.
    0.511
AZC_2503
ABC transporter permease protein.
    0.506
AZC_1942
ABC-type nitrate/sulfonate/bicarbonate transport system permease.
    0.488
nrtB
Nitrate transporter component.
    0.467
AZC_3168
Sulfate ester transporter permease component.
    0.463
AZC_3169
Sulfate ester transport system permease protein.
    0.452
AZC_2469
ABC transporter.
 
    0.439
AZC_3164
ABC transporter permease protein.
    0.437
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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