Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AZC_0278 | AZC_0416 | Putative diguanylate cyclase; GGDEF. | Putative signaling protein. | 0.734 |
AZC_0278 | AZC_0489 | Putative diguanylate cyclase; GGDEF. | Diguanylate cyclase; Phosphodiesterase precursor, GGDEF precursor. | 0.608 |
AZC_0278 | AZC_1421 | Putative diguanylate cyclase; GGDEF. | PAS/PAC sensor hybrid histidine kinase. | 0.827 |
AZC_0278 | AZC_2411 | Putative diguanylate cyclase; GGDEF. | REC, signal receiver domain. | 0.436 |
AZC_0278 | AZC_2412 | Putative diguanylate cyclase; GGDEF. | Response regulator; GGDEF domain protein. | 0.427 |
AZC_0278 | AZC_3085 | Putative diguanylate cyclase; GGDEF. | Hypothetical 80.5 kDa protein in ntrC 5'region. | 0.889 |
AZC_0278 | AZC_3923 | Putative diguanylate cyclase; GGDEF. | Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor. | 0.834 |
AZC_0278 | AZC_4096 | Putative diguanylate cyclase; GGDEF. | Unknown function protein; With GGDEF motif, DUF1. | 0.611 |
AZC_0278 | AZC_4658 | Putative diguanylate cyclase; GGDEF. | Conserved putative membrane protein. | 0.911 |
AZC_0278 | AZC_4679 | Putative diguanylate cyclase; GGDEF. | Proble transcriptional regulator. | 0.673 |
AZC_0416 | AZC_0278 | Putative signaling protein. | Putative diguanylate cyclase; GGDEF. | 0.734 |
AZC_0416 | AZC_0489 | Putative signaling protein. | Diguanylate cyclase; Phosphodiesterase precursor, GGDEF precursor. | 0.813 |
AZC_0416 | AZC_1421 | Putative signaling protein. | PAS/PAC sensor hybrid histidine kinase. | 0.931 |
AZC_0416 | AZC_2411 | Putative signaling protein. | REC, signal receiver domain. | 0.705 |
AZC_0416 | AZC_2412 | Putative signaling protein. | Response regulator; GGDEF domain protein. | 0.710 |
AZC_0416 | AZC_3085 | Putative signaling protein. | Hypothetical 80.5 kDa protein in ntrC 5'region. | 0.936 |
AZC_0416 | AZC_3923 | Putative signaling protein. | Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor. | 0.948 |
AZC_0416 | AZC_4096 | Putative signaling protein. | Unknown function protein; With GGDEF motif, DUF1. | 0.882 |
AZC_0416 | AZC_4658 | Putative signaling protein. | Conserved putative membrane protein. | 0.936 |
AZC_0416 | AZC_4679 | Putative signaling protein. | Proble transcriptional regulator. | 0.709 |
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