STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3085Hypothetical 80.5 kDa protein in ntrC 5'region. (735 aa)    
Predicted Functional Partners:
AZC_4096
Unknown function protein; With GGDEF motif, DUF1.
 
 0.981
AZC_4679
Proble transcriptional regulator.
  
 
 0.972
AZC_3923
Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor.
 
 
 0.961
AZC_0416
Putative signaling protein.
 
 
0.936
AZC_2412
Response regulator; GGDEF domain protein.
 
 0.933
AZC_1421
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.931
AZC_2411
REC, signal receiver domain.
 
 0.917
AZC_0489
Diguanylate cyclase; Phosphodiesterase precursor, GGDEF precursor.
 
 
0.892
AZC_0278
Putative diguanylate cyclase; GGDEF.
 
 0.889
AZC_4658
Conserved putative membrane protein.
 
 
0.886
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.