STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3115Isoprenylcysteine carboxyl methyltransferase. (206 aa)    
Predicted Functional Partners:
AZC_3114
Conserved hypothetical membrane spanning protein.
 
     0.939
AZC_2890
Putative serine/threonine protein kinase.
  
     0.714
AZC_2405
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.612
AZC_3112
Putative glycosyltransferase.
 
     0.597
AZC_3054
Hypothetical protein.
  
     0.581
AZC_2403
Acyl carrier protein.
 
     0.548
AZC_3997
Hypothetical protein.
  
     0.543
AZC_3113
Putative glycosyltransferase.
       0.540
mrp
Putative ATPase; Involved in chromosome partitioning.
 
    0.535
AZC_1349
Protein of unknown function; DUF1275.
  
     0.513
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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