STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3185Endoribonuclease L-PSP. (132 aa)    
Predicted Functional Partners:
AZC_3190
Flavoprotein monooxygenase; NADH:flavin oxidoreductase/NADH oxidase.
 
  
 0.952
AZC_3188
Putative enoyl-CoA hydratase; Isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.947
AZC_3186
Putative 4-hydroxybenzoyl CoA thioesterase.
 
     0.946
AZC_3187
Putative acyl-CoA dehydrogenase.
 
 
   0.939
AZC_3189
Short-chain dehydrogenase; Reductase SDR precursor; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.927
rpmA
50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
     
 0.787
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
     
 0.785
AZC_3184
Putative acid-CoA ligase.
 
  
 0.782
marR-12
Regulatory protein.
 
     0.767
AZC_3191
Putative substrate-binding protein.
 
     0.752
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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