STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3205Putative membrane-fusion protein. (443 aa)    
Predicted Functional Partners:
AZC_3206
Transmembrane region:ABC transporter:peptidase C39, bacteriocin processing.
 
 
 0.980
AZC_3207
Putative ABC-type bacteriocin/lantibiotic exporter; Contain an N-terminal double-glycine peptidase domain.
 
 
 0.980
AZC_3203
Cyanuric acid amidohydrolase; Cyclic amide hydrolase of unknown substrate specificity. Catalyzes the hydrolytic ring-opening of a cyclic amide. Does not act on cyanuric acid nor barbituric acid.
       0.618
AZC_3204
Putative glutamyl-tRNA(Gln) amidotransferase subunit.
       0.618
tolC
Type I secretion outer membrane protein.
  
 
 0.556
AZC_3200
Putative ABC-transporter ATP-binding protein.
       0.546
AZC_3201
ABC transporter permease 1; Belongs to the binding-protein-dependent transport system permease family.
       0.546
AZC_3202
ABC transporter permease protein 2; Belongs to the binding-protein-dependent transport system permease family.
       0.546
AZC_4215
Putative anti-sigma factor.
  
     0.527
nodT
RND efflux system outer membrane lipoprotein.
  
 
 0.521
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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