STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3208Putative lantibiotic modifying enzyme. (971 aa)    
Predicted Functional Partners:
AZC_3209
Unknown protein.
       0.776
AZC_3207
Putative ABC-type bacteriocin/lantibiotic exporter; Contain an N-terminal double-glycine peptidase domain.
 
   
 0.713
AZC_3206
Transmembrane region:ABC transporter:peptidase C39, bacteriocin processing.
 
   
 0.683
AZC_3205
Putative membrane-fusion protein.
 
     0.490
AZC_3210
ABC-type branched-chain amino acid transport periplasmic component.
       0.459
AZC_3211
3-hydroxybutyrate dehydrogenase precursor.
       0.451
AZC_3212
3-hydroxybutyryl-CoA dehydrogenase.
       0.417
AZC_2089
Uncharacterized protein; Conserved in bacteria, COG4529.
  
     0.411
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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