STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3219Cellulose acetylase; Subunit WssH; Belongs to the membrane-bound acyltransferase family. (461 aa)    
Predicted Functional Partners:
AZC_3220
Cell morphology protein.
 
  
 0.957
AZC_3221
Twin-arginine translocation pathway signal precursor.
 
  
 0.946
AZC_3217
Bacteriophage N4 adsorption protein B.
  
 
 0.750
AZC_3246
Vicibactin biosynthesis non-ribosomal peptide synthase protein.
 
  
 0.739
AZC_3218
Cell morphology protein.
     
 0.720
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
 
 0.642
AZC_3215
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.631
AZC_3216
Hypothetical protein.
       0.627
AZC_0951
Hypothetical protein.
 
     0.608
AZC_2060
Acyl carrier protein.
  
 
 0.558
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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