STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3282Amino acid ABC transporter permease protein; 3-TM region, His/Glu/Gln/Arg/opine. (217 aa)    
Predicted Functional Partners:
AZC_3281
ABC transporter.
  0.996
AZC_3283
Amino acid ABC transporter permease protein; 3-TM region, His/Glu/Gln/Arg/opine.
 
  
 
0.981
AZC_2072
ABC-type amino acid transport; Signal transduction systems, periplasmic component/domain.
   0.962
AZC_1586
Amino acid ABC transporter permease protein precursor.
 
0.945
AZC_3280
Extracellular solute-binding protein; Family 3 precursor.
   0.915
AZC_2618
ABC transporter nucleotide binding ATPase protein.
   0.838
AZC_4129
ABC transporter nucleotide binding ATPase protein.
   0.832
AZC_1451
ABC transporter substrate binding protein.
   0.814
AZC_2615
ABC transporter substrate binding protein.
   0.813
AZC_4407
Putative ABC transporter periplasmic solute-binding protein.
   0.811
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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