Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AZC_3333Uncharacterized conserved protein; Contains double-stranded beta-helix domain. (115 aa)    
Predicted Functional Partners:
kduI
Putative 5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
  0.990
AZC_3334
2-deoxy-D-gluconate 3-dehydrogenase.
 
     0.814
AZC_3337
Putative C4-dicarboxylate transport small permease component; TRAP-type.
 
     0.730
uxaC
Glucuronate isomerase.
 
     0.659
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.633
AZC_3336
C4-dicarboxylate large membrane transport protein.
       0.589
AZC_3338
C4-dicarboxylate-binding protein.
 
     0.491
gntR-12
Transcriptional regulator; GntR family.
 
  
 0.433
AZC_3339
GntR-family transcriptional regulator.
 
     0.420
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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