STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3405Flavin-containing protein; Amine oxidase family. (542 aa)    
Predicted Functional Partners:
AZC_4111
Putative decarboxylase.
    
 0.914
AZC_4484
Amine oxidase precursor.
  
  
 
0.908
AZC_1789
Aldehyde dehydrogenase.
    
 0.903
AZC_2036
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.903
AZC_2904
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.903
AZC_4177
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.903
AZC_0320
Alcohol dehydrogenase.
    
  0.901
AZC_0105
Glutathione-dependent formaldehyde dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.900
AZC_2038
Phosphoglycerate dehydrogenase.
    
 0.833
AZC_3359
Putative 2-hydroxyacid dehydrogenase.
    
 0.833
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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