STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixUFixU protein. (72 aa)    
Predicted Functional Partners:
AZC_3413
Conserved hypothetical protein; Glycoside hydrolase, family 6.
 
    0.973
AZC_3419
Iron-sulfur cofactor synthesis protein.
 
  
 0.901
nifB
Nitrogenase cofactor biosynthesis protein.
 
  
 0.896
nifW
Nitrogenase-stabilizing/protective protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.886
nifX
Nitrogenase molybdenum-iron NifX protein.
 
  
 0.862
AZC_3418
Conserved hypothetical protein; With FeS4 cluster.
 
    0.860
AZC_1035
Protein of unknown function; DUF269.
 
    0.854
nifZ
NifZ protein.
 
     0.846
fdxB
Ferredoxin.
 
  
 0.807
nifE
Nitrogenase MoFe cofactor biosynthesis NifE protein; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.801
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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