STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3522Conserved hypothetical protein; Drug resistance transporter EmrB/QacA subfamily. (556 aa)    
Predicted Functional Partners:
AZC_3521
Glycosyltransferase; Family 28.
 
   
 0.841
AZC_4436
Putative multidrug resistance efflux pump.
 
 0.674
AZC_3520
FAD-binding oxidoreductase.
 
     0.649
araJ
Putative arabinose efflux permease.
  
   
 0.628
AZC_0743
Drug resistance transporter; Bcr/CflA subfamily.
  
   
 0.619
AZC_3523
Unknown protein.
       0.565
AZC_1692
Putative protease.
  
     0.543
AZC_0980
Conserved hypothetical protein.
  
     0.492
AZC_1386
Putative transmembrane efflux protein; From the major facilitator.
  
   
 0.489
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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