STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3549Protein of unknown function; DUF1468. (153 aa)    
Predicted Functional Partners:
AZC_3550
Protein of unknown function; DUF112, transmembrane.
 
  
 0.959
AZC_3548
Conserved hypothetical protein; Bordetella uptake gene.
 
  
 0.937
AZC_2176
Bordetella uptake (bug) protein.
 
  
 0.876
AZC_3350
Uncharacterized protein; Family UPF0065:Tat pathway signal precursor.
 
  
 0.863
AZC_0556
Uncharacterized protein; Conserved in bacteria.
 
  
 0.852
AZC_4336
Conserved hypothetical membrane protein.
 
  
 0.758
AZC_0466
Conserved hypothetical protein.
 
  
 0.718
AZC_4334
Conserved hypothetical exported protein.
 
  
 0.644
AZC_3723
Conserved hypothetical protein; Quinoprotein amine dehydrogenase, beta chain-like.
  
     0.519
AZC_4688
Putative ammonia monooxygenase.
 
    0.505
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.