STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3558glutaryl-CoA dehydrogenase. (405 aa)    
Predicted Functional Partners:
AZC_0802
enoyl-CoA hydratase; Isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.958
AZC_1544
Putative enoyl-CoA hydratase.
 
 0.953
AZC_0996
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.938
AZC_2972
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.938
AZC_3187
Putative acyl-CoA dehydrogenase.
  
  
 
0.924
AZC_2509
acyl-CoA dehydrogenase.
  
  
 
0.914
AZC_4011
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
 0.911
lpdA
Dihydrolipoamide dehydrogenase.
  
 0.909
AZC_4009
Dihydrolipoamide dehydrogenase.
  
 0.909
AZC_4426
Putative acyl-CoA dehydrogenase.
     
  0.900
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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