STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3598DNA primase; Helicase. (551 aa)    
Predicted Functional Partners:
AZC_3597
DNA polymerase.
 
  
 0.915
AZC_3592
Putative phage exonuclease.
 
  
 0.905
AZC_3607
DNA-directed RNA polymerase; Bacteriophage and mitochondrial type.
 
     0.792
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
  
 
 0.783
AZC_3599
Unknown protein.
       0.773
AZC_3600
Unknown protein.
       0.773
AZC_3588
Head-to-tail joining protein.
  
     0.765
AZC_3575
Phage-related DNA maturase.
  
     0.754
AZC_3601
Putative N-acetylmuramoyl-L-alanine amidase.
 
     0.693
AZC_1281
4Fe-4S binding domain protein.
  
 
 0.670
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.