STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3616Putative cysteine desulfurase; nifS-like protein. (405 aa)    
Predicted Functional Partners:
nifU
NifU-like protein.
  
 0.984
AZC_2198
Hypothetical protein; Putative SirA_YedF_YeeD, SirA, YedF, and YeeD; Belongs to the sulfur carrier protein TusA family.
   
 0.982
AZC_0235
Putative molybdenum cofactor biosynthesis protein.
   
 0.975
nifQ
NifQ protein.
  
 0.942
AZC_2826
Rhodanese-related sulfurtransferase.
  
 0.918
AZC_3403
Rhodanese-related sulfurtransferase.
  
 0.918
nifS
Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
  
 
0.912
AZC_3609
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
 
  
 0.804
AZC_2219
Ferredoxin.
 
 0.788
dnaK
Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
  
 0.766
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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