STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_37532OG-Fe(II) oxygenase superfamily. (226 aa)    
Predicted Functional Partners:
AZC_3754
TonB-dependent siderophore receptor.
 
  
 0.949
AZC_1913
TonB-dependent receptor.
 
  
 0.669
AZC_1333
TonB-dependent receptor.
 
  
 0.632
AZC_1729
TonB-dependent siderophore receptor precursor.
 
  
 0.610
AZC_1626
Putative TonB-dependent siderophore receptor.
 
  
 0.580
AZC_3240
TonB-dependent siderophore receptor precursor.
 
  
 0.571
AZC_1828
Sulfite reductase alpha subunit.
 
   
 0.507
AZC_3750
Putative short-chain dehydrogenase.
  
    0.500
AZC_3751
GCN5-related N-acetyltransferase.
       0.488
AZC_3752
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.488
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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