STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3759Cytochrome bd-type quinol oxidase subunit 1. (478 aa)    
Predicted Functional Partners:
AZC_3760
Cytochrome bd-type quinol oxidase subunit 2.
 0.999
AZC_1353
Cytochrome bd ubiquinol oxidase subunit II.
 
 0.986
AZC_0585
Cytochrome d oxidase subunit II.
 
 0.944
cydA
Cytochrome d ubiquinol oxidase subunit I.
  
  
 
0.915
AZC_1354
Cytochrome BD2 subunit I.
  
  
0.914
AZC_3761
Hypothetical protein.
       0.767
fixN
Cytochrome c oxidase subunit 1 homolog; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c or a quinol are transferred to the bimetallic center formed by a high-spin heme and copper B.
    
 0.695
nuoK
NADH dehydrogenase I chain K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.
     
 0.693
AZC_3746
Succinate dehydrogenase/fumarate reductase iron-sulfur protein.
     
 0.693
cydD
ABC transporter ATP-binding protein.
 
  
 0.687
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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