STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3844Hypothetical protein. (397 aa)    
Predicted Functional Partners:
AZC_3843
ParB-like partition protein.
 
     0.884
AZC_3842
Protein of unknown function; DUF736.
 
     0.854
AZC_3841
Hypothetical protein.
 
     0.820
AZC_3826
Conserved hypothetical protein; Helix-turn-helix, Fis-type.
  
   
 0.671
AZC_3856
Conserved hypothetical protein; Filamentation induced by cAMP protein Fic.
  
   
 0.638
AZC_3880
Hypothetical protein.
  
     0.519
AZC_2235
Conserved hypothetical protein; Plasmid stabilization system.
  
     0.507
AZC_3837
Hypothetical protein.
 
     0.471
relB
RelB antitoxin.
  
     0.434
AZC_3845
Putative insertion sequence transposase protein.
       0.429
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.