STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3871Putative ABC amino acid transporter permease/substrate-binding protein. (227 aa)    
Predicted Functional Partners:
AZC_3874
Amino acid ABC transporter ATP-binding protein.
  0.996
AZC_3875
Amino acid ABC transporter ATP-binding protein.
  0.996
AZC_3872
Putative amino acid ABC transporter permease protein.
  
 
0.987
AZC_2072
ABC-type amino acid transport; Signal transduction systems, periplasmic component/domain.
   0.977
AZC_3870
Putative amino acid ABC transporter periplasmic solute-binding protein.
 
   0.945
AZC_2070
Amino acid ABC transporter ATP-binding protein.
   0.852
AZC_2734
ABC transporter ATP-binding protein.
   0.852
AZC_0818
ABC transporter ATP-binding protein.
   0.849
AZC_0727
Amino acid ABC transporter ATP-binding protein.
   0.847
AZC_1839
Polar amino acid uptake family ABC transporter ATP-binding protein.
   0.845
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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