STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3908Periplasmic sensor signal transduction histidine kinase. (352 aa)    
Predicted Functional Partners:
AZC_1854
Response regulator receiver.
 
 0.997
AZC_2411
REC, signal receiver domain.
 0.971
AZC_2412
Response regulator; GGDEF domain protein.
 0.963
AZC_3122
PAS protein.
  
 
0.927
AZC_3766
Putative two-component sensor histidine kinase; Response regulator hybrid protein.
 
 
   0.913
pdhB
Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.895
AZC_1938
HWE histidine kinase.
 
    
 0.878
phoB
Phosphate regulon transcriptional regulatory protein.
 
 0.839
AZC_3974
Response regulator receiver.
 
 0.827
AZC_1940
Response regulator receiver.
 
 0.821
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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