STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_3927Conserved hypothetical protein; OstA-like protein. (198 aa)    
Predicted Functional Partners:
AZC_3926
Putative ABC transporter ATP-binding protein in ntrA/rpoN 5'region; Belongs to the ABC transporter superfamily.
  
  
 0.951
lptD
Putative organic solvent tolerance protein-like precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
 
 0.932
AZC_3928
Putative uncharacterized protein; Conserved in bacteria precursor.
 
   
 0.870
bamA
Putative outer membrane protein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.791
AZC_4325
Putative permease precursor.
 
   
 0.682
ntrY
Nitrogen regulation protein ntrY; Member of the two-component regulatory system NtrY/NtrX involved in nitrogen level control. Probably activates NtrX by phosphorylation.
 
     0.635
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.631
AZC_4322
Hypothetical protein.
 
   
 0.620
AZC_4324
Permease precursor.
 
   
 0.613
AZC_3929
3'-5' exonuclease.
 
     0.588
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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