STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4064Conserved hypothetical protein; FMN-binding split barrel. (259 aa)    
Predicted Functional Partners:
AZC_2245
Iron compound ABC transporter periplasmic iron compound-binding protein.
   
    0.660
AZC_0186
Putative ABC transporter iron compound-binding protein.
  
    0.580
AZC_1624
ABC Fe+3 hydroxamate (ferrichrome) transporter; Periplasmic siderophore binding protein.
  
    0.580
AZC_3248
Ferrichrome-binding periplasmic protein precursor.
  
    0.580
AZC_2743
High-affinity Fe2+/Pb2+ permease.
   
    0.579
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.558
AZC_4384
TonB-dependent haem/haemoglobin receptor precursor.
  
  
 0.537
AZC_0460
Large subunit glutamate synthase.
     
 0.495
AZC_4066
Histidine kinase; ATP-binding region, HAMP region.
       0.484
AZC_4067
PTS system Hpr kinase.
       0.484
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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