STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4086Hypothetical protein. (62 aa)    
Predicted Functional Partners:
AZC_4184
Putative FOF1 atp synthase; Subunit I transmembrane.
 
    0.824
AZC_0873
Unknown protein; Belongs to the UPF0337 (CsbD) family.
   
    0.731
AZC_1464
Protein of unknown function; DUF1328.
  
    0.660
AZC_3531
Putative mismatched base pair and cruciform DNA recognition protein; CsbD-like family; Belongs to the UPF0337 (CsbD) family.
   
    0.635
AZC_4085
Conserved hypothetical protein; Rubrerythrin.
       0.510
merR-3
Regulatory protein.
   
    0.459
AZC_2080
ABC transporter substrate binding protein.
  
     0.454
AZC_3729
Conserved hypothetical protein; Twin-arginine translocation pathway signal.
  
    0.420
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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