STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fmdBPutative formamidase regulatory protein. (117 aa)    
Predicted Functional Partners:
AZC_4101
Formamidase.
 
   
 0.914
AZC_4102
Putative ABC transporter ATP-binding component.
 
     0.867
AZC_4103
ABC transporter ATP-binding protein.
 
     0.864
AZC_4104
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.861
AZC_4105
Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.853
AZC_4106
Amide-urea binding protein precursor.
 
     0.817
AZC_4107
Multi-sensor hybrid histidine kinase.
 
     0.795
luxR-4
Two component transcriptional regulator; LuxR family.
 
     0.755
AZC_3884
Acetamidase; Formamidase.
 
   
 0.472
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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