STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maoC-4MaoC-like dehydratase. (158 aa)    
Predicted Functional Partners:
maoC-3
MaoC-like dehydratase.
 
    
0.828
ychF
Conserved hypothetical protein 92; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.667
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
 0.627
AZC_2873
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.504
AZC_2973
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.504
vapC-3
PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.470
AZC_2700
Isochorismatase hydrolase.
  
  
 0.428
AZC_0306
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.408
AZC_0996
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.408
AZC_2875
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.408
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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