STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4173Short-chain dehydrogenase; Reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)    
Predicted Functional Partners:
AZC_2506
Short-chain dehydrogenase; Adh short.
 
    0.663
AZC_4174
Putative glycosyltransferase; Group 1.
       0.618
AZC_3749
Putative UDP-glucose 4-epimerase.
    0.600
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
  
 0.551
AZC_2341
NAD-dependent epimerase; Dehydratase:short-chain dehydrogenase/reductase SDR.
    0.544
AZC_1980
Short-chain dehydrogenase/reductase SDR.
 
    0.523
AZC_2650
Putative oxidoreductase.
 
    0.481
ribA
Riboflavin biosynthesis protein; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.481
AZC_4379
Short-chain dehydrogenase; Reductase SDR.
 
    0.480
AZC_3750
Putative short-chain dehydrogenase.
    0.440
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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