STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4217Hypothetical protein. (223 aa)    
Predicted Functional Partners:
AZC_4219
Putative Arabinose efflux permease precursor.
 
     0.943
AZC_4218
Putative ABC-type uncharacterized transport system periplasmic component precursor.
 
     0.936
AZC_4223
Histidine kinase; HAMP region precursor, protein phosphatase 2C-like.
 
     0.852
AZC_4220
Hypothetical protein.
       0.778
AZC_4216
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.777
AZC_4019
Putative membrane protein.
  
    0.715
AZC_0948
Outer membrane autotransporter barrel protein.
  
     0.691
AZC_1692
Putative protease.
  
     0.634
AZC_2901
Type III fibronectin; Carbohydrate-binding family V/XII.
  
     0.618
AZC_4221
Hypothetical protein.
       0.594
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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