STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4236Phenylacetic acid degradation-related protein. (168 aa)    
Predicted Functional Partners:
AZC_4583
Putative phenylacetate-CoA ligase.
 
  
 0.665
AZC_4235
Hypothetical protein; MOSC domain.
       0.563
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
 
 0.529
AZC_4588
AMP-dependent synthetase and ligase.
 
   
 0.505
AZC_4237
Unknown protein.
       0.498
plsX
Fatty acid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.480
hisS
histidyl-tRNA synthetase; Class IIa.
       0.448
AZC_4509
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.440
AZC_3246
Vicibactin biosynthesis non-ribosomal peptide synthase protein.
   
 
 0.422
sfsA
Sugar fermentation stimulation protein; Belongs to the SfsA family.
       0.402
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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