STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4327Uncharacterized protein; Conserved in bacteria, ErfK_YbiS_YhnG, ErfK/YbiS/YcfS/YnhG. (331 aa)    
Predicted Functional Partners:
AZC_4326
Penicillin-insensitive murein endopeptidase precursor; Peptidase U6.
 
     0.810
AZC_3997
Hypothetical protein.
  
     0.676
lptD
Putative organic solvent tolerance protein-like precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
    0.587
AZC_0779
Putative cysteine rich repeat domain protein.
  
     0.579
der
Transcriptional regulator; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.578
AZC_1214
Putative outer membrane protein 2.
  
     0.537
AZC_4322
Hypothetical protein.
 
     0.536
AZC_1780
Hypothetical protein.
  
     0.460
AZC_4324
Permease precursor.
       0.458
AZC_4325
Putative permease precursor.
       0.458
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.