STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4330Hypothetical protein. (238 aa)    
Predicted Functional Partners:
AZC_4329
Hypothetical protein.
       0.776
lptD
Putative organic solvent tolerance protein-like precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
     0.763
AZC_0713
Conserved hypothetical protein; Inactivated superfamily I helicase.
  
     0.702
AZC_0095
Putative outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.686
AZC_2296
Conserved hypothetical protein; ATP-dependent DNA ligase.
  
    0.678
AZC_2805
Hypothetical protein; Proline-rich region.
 
     0.670
AZC_3980
Hypothetical protein.
  
     0.667
AZC_3148
Uncharacterized conserved protein; UCP032146; Belongs to the UPF0262 family.
  
   
 0.627
AZC_2317
Hypothetical protein.
  
     0.626
AZC_1208
NADH protein; Ubiquinone oxidoreductase 17.2 kD subunit.
  
   
 0.624
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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