STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4359NADH dehydrogenase. (318 aa)    
Predicted Functional Partners:
AZC_4356
NADH-ubiquinone oxidoreductase; Chain 49kDa.
 
 
 0.999
hyqI
NADH ubiquinone oxidoreductase; 20 kDa subunit.
 
 
 0.998
hyqB
NADH dehydrogenase.
 
 
 0.993
hyqF
NADH dehydrogenase.
 
 
 0.992
hyqE
Hypothetical protein.
 
  
 0.975
nuoI
NADH-quinone oxidoreductase chain I protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.838
hyqR
Hypothetical protein; Helix-turn-helix motif.
 
     0.833
fdxB
Ferredoxin.
  
 
 0.825
fdxN-2
2(4Fe-4S) ferredoxin.
  
 
 0.825
AZC_3454
Formate dehydrogenase alpha subunit.
  
 
 0.778
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.