STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4384TonB-dependent haem/haemoglobin receptor precursor. (764 aa)    
Predicted Functional Partners:
AZC_1260
C-terminal TonB protein.
 
 
 0.867
hmuT
Hemin-binding periplasmic protein.
  
 0.841
hmuV
ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.770
AZC_1301
Endoglucanase.
 
 
 
 0.751
AZC_2635
With a C-terminal OMP (outer membrane protein) domain.
 
 
 
 0.750
AZC_3246
Vicibactin biosynthesis non-ribosomal peptide synthase protein.
  
  
 0.731
AZC_4383
Conserved hypothetical protein; Antibiotic biosynthesis monooxygenase.
 
    0.717
motC
Hypothetical MotC chemotaxis protein.
   
 
 0.707
tolA
Putative TolA protein.
  
 
 0.663
AZC_4433
Putative TonB-dependent receptor.
  
  
 0.650
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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