STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4397Putative taurine transport system protein. (391 aa)    
Predicted Functional Partners:
AZC_4399
ABC transporter ATP-binding protein.
 
    0.889
tauC
Putative ABC-type nitrate/sulfonate/bicarbonate transport permease.
 
    0.880
AZC_4402
Allophanate hydrolase subunit 2.
 
   
 0.880
AZC_4400
Hypothetical protein.
 
     0.846
AZC_4403
Putative urea amidolyase.
 
    0.840
AZC_4401
Hypothetical protein.
 
     0.838
AZC_1523
glutamyl-tRNA(Gln) amidotransferase.
 
    0.746
AZC_4395
Glycerol-3-phosphate ABC transporter permease protein.
       0.414
ugpE
Putative sn-glycerol-3-phosphate transmembrane ABC transporter protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
       0.414
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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